Rajendra Gupta
stores the content on a new page

Database Cloning in Amazon Aurora

January 11, 2021 by

Amazon Aurora provides a MySQL and PostgreSQL compatible relation database with performance and feature enhancements over the existing databases. In the previous articles, we discussed the following features. You can refer to ToC at the bottom.

  • Backtrack
  • Global Database
  • Amazon Aurora Serverless

In this article, we will cover fast database cloning and its usage for aurora databases.

Overview of Amazon Aurora Clone Database

Suppose you want to test the application code, run analytical queries, performance testing. You require the production database in the development environment. Usually, we restore the production database backup into development and give it to users to perform their operations. Aurora clone is a quick and cost-effective way to create a duplicate aurora cluster volume, data. The aurora clusters use shared cluster volumes, and it maintains 6 copies of data in three availability zones.

Suppose your database has the following 5 pages in the cluster volume. Currently, your production instance reads data from these pages for any users’ queries.

Amazon Aurora pages

Let’s say the database is idle, i.e. there are no active transactions (data modification) on your aurora database. At this point, you clone the aurora cluster. In this case, initially, the cloned cluster also uses the existing source volume. It does not copy any pages until no data (page) modifies. In this scenario, it does not require any additional storage.

As shown below, both the source and Clone cluster point to the same data pages in shared storage.

Amazon Aurora clone db

Now, the user connects with the writer endpoint on the source (production) cluster, and it modifies page 5. In this case, the source aurora cluster points to the modified page 5. It does not make changes to an existing page; instead, it writes a new page with the modified data. Therefore, you require additional storage for the modified page.

The cloned copy of the aurora cluster still points to the old page 5. It does not get the updated copy of the page.

cloned copy of amazon aurora cluster

Similarly, if page 4 also modifies on a production cluster, the source aurora stores the content on a new page. The clone cluster still points to old page 4, as shown below:

stores the content on a new page

Usually, the clone database is considered to be a read-only database. In aurora, we can modify data for the clone database as well. For example, let’s say, you connect to the aurora clone writer endpoint, execute the query, and it modifies page 1.

In this case, the cloned cluster points to the newly modified page while the source still points to the original page. Here, we require the additional space for the clone cluster volume. Any changes in the clone database do not impact the source aurora instance. It makes it suitable for testing your queries, performance benchmarking, load testing.

performance benchmarking

The storage requirement depends on data modifications. If you have too many data page changes, it will require additional space for each copy of the source page. You only pay for the changed page. Aurora uses the copy-on-write protocol to create a new page copy, update the pointers when any changes occur in either source or clone database. Aurora allows you to create multiple clones for your data.

Aurora Clone limitations

Aurora clone features come with few limitations. It is essential to know those limitations before we proceed with the implementation.

  • Aurora clone database is not supported on Serverless architecture or cluster with parallel query feature.
  • You should have at least one database instance in the Aurora cluster.
  • Both Source and clone aurora clusters should be in the same region.
  • You can create a maximum of 15 clones for a cluster. Further, each clone copy also supports a maximum of 15 clones.

Create a database clone for Amazon Aurora

In this article, I have the following aurora cluster before we create a clone.

  • Aurora cluster name: sqlshackdemo
    • Writer: sqlshackdemo-instance-1
    • Reader:sqlshackdemo-instance-1-us-east-1a

Create a database clone

  • An AWS EC2 Linux instance that connects with the Aurora MySQL cluster
  • Install MySQL client tools for connecting with aurora instance

AWS EC2 Linux

To connect with the aurora MySQL instance, click on the aurora cluster name in the database terminal and note down the writer endpoint.

database terminal

In the EC2 terminal, connect with the aurora endpoint using the writer endpoint:

$ mysql -h sqlshackdemo.cluster-c2q9j076043d.us-east-1.rds.amazonaws.com -P 3306 -u admin -p

writer endpoint.

On the source cluster, we have a [ProductData] table in the [SQLShackDemo] database. It has two records, as shown below:

Sample records

Now, to create the Clone, select the aurora cluster, go to Actions-> Create Clone.

Create Clone.

It launches the clone configuration page. It has almost the same configurations for your source cluster. However, you can give inputs such as DB instance identifier, DB instance size, VPC, Subnet, Public accessibility. In this demo, I specify the aurora cluster clone as [AuroraDBClone].

clone configuration page

Select the desired clone instance size. You can use both burstable and memory-optimized classes for the clone instance.

memory-optimized classes

Click on Create Clone after specifying the cluster configuration parameters.

cluster configuration parameters

It starts creating the cloned cluster and instance, as shown below:

cloned cluster

It takes quite a few minutes to create the aurora clone cluster. The clone creation time depends upon the database size, instance class.

As we can see below, both the source and clone cluster is in available status. The clone and source instance both are in the same region us-east-1b.

Amazon aurora clone cluster

Now, the application can connect with the cloned cluster using its endpoint. As shown below, the aurora clone cluster also has a reader and writer endpoint. It also uses port 3306 for its communication purpose.

cloned cluster using its endpoint

Verify table checksum in source and Clone Aurora cluster

As stated earlier, the cloned cluster refers to the same database pages in the shared storage in an idle cluster. To verify it, let’s perform a CHECKSUM for the table [ProductsData] contents. If the table checksum is different, that means both source and clone instance tables are different in some way. The checksum should be similar for both tables in an idle (No Data modification) instance.

In the following screenshot, we can see that the table checksum is the same for both the Source and Clone aurora cluster. It shows that our table is identical in both clusters.

Verify table checksum

Modify data on Source Aurora cluster

We can perform DML on both Source and Clone Aurora clusters. In the below image, we update the [productname] in the source instance.

Modify data

Now, we check the records as well as their checksum in both clusters. As we can see here, on the source cluster, record and checksum are updated. However, our clone instance stills give us old records and their checksum. It proves our point that Aurora uses a copy-on-write protocol and creates a new page for any data modifications.

checksum in both clusters

Modify data on Clone Aurora cluster

In this part, we connect to the aurora cluster using the writer endpoint and perform a DML operation. It should not impact our source aurora cluster data and table checksum.

Note the following in the below screenshot:

  • Source data and its checksum remain intact
  • The clone instance record is updated as per our DML, and it has a modified table checksum as well

Modify data on Clone Amazon Aurora cluster

Cross-account cloning

Amazon Aurora allows you to share the Clone with another AWS account. Usually, in an organization, we have separate accounts for production and non-production environment. Similarly, you might want to share the Clone with an external vendor for resolving specific issues, performance problems. In this case, you need to provide permissions for other AWS accounts so that they can access your clone cluster. You can explore more about cross-account cloning, its implementations and restrictions in AWS blogs.


Amazon Aurora clone feature allows creating the database copy for performing testing quickly and efficiently. It does not cost you much because it consumes space for pages that requires modification. It also allows you to create multiple clones and even clone from a cloned database.

Table of contents

Deploy your Amazon Aurora database clusters for MySQL
Explore Amazon Aurora global databases with MySQL compatibility
Rewind or Forward the Amazon Aurora Cluster with MySQL compatibility using backtrack feature
Implement an Amazon Aurora Serverless cluster
Database Cloning in Amazon Aurora
Export Amazon Aurora MySQL or Amazon RDS snapshots to AWS S3 buckets

Rajendra Gupta

About Rajendra Gupta

As an MCSA certified and Microsoft Certified Trainer in Gurgaon, India, with 13 years of experience, Rajendra works for a variety of large companies focusing on performance optimization, monitoring, high availability, and disaster recovery strategies and implementation. He is the author of hundreds of authoritative articles on SQL Server, Azure, MySQL, Linux, Power BI, Performance tuning, AWS/Amazon RDS, Git, and related technologies that have been viewed by over 10m readers to date. He is the creator of one of the biggest free online collections of articles on a single topic, with his 50-part series on SQL Server Always On Availability Groups. Based on his contribution to the SQL Server community, he has been recognized with various awards including the prestigious “Best author of the year" continuously in 2020 and 2021 at SQLShack. Raj is always interested in new challenges so if you need consulting help on any subject covered in his writings, he can be reached at rajendra.gupta16@gmail.com View all posts by Rajendra Gupta